Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827065.1_cds_XP_016502932.1_16522
CDS Infomation

[gene=LOC107821055] [db_xref=GeneID:107821055] [protein=homeobox-leucine zipper protein PROTODERMAL FACTOR 2-like] [protein_id=XP_016502932.1] [location=join(11402..11449,12072..12512,12735..12836,13320..13520,13627..13813,19671..19936,20509..20604,21380..21754)] [gbkey=CDS]
Sequence

ATGTCCCCTGAAGAGAAACCAGGGTTGGAGCACTATGGATATTTAGAGTCCATGTCAGTC
TTGGAAAGGGACATGCCTCGAGCAAGTGATCTTCTTTTATCAGTTTCAATGTGTGCTGAA
GTATACAAAGGCAAAATTGTTGATCTTGCTTTAGCAGCAAGTGAAGAGCTAAGACAAATG
GCTCAAGAACAAGAACCATTATGGCTATTTGATACCAACAAGCAAACTGAGATTCTCAAT
GAAGCAGAATATAAGCGACGATTCGTCCATCTTGATCCTACATTAGAGGAAATAATCAAA
GTCATTACAAGAGGAGGGCCTATTGACATACCAAATCTTAATGGAAATGTTGATGACACA
AGTGAAAATGCACAAATGTCAATGTTAGAAATGGAAAATTCAGCAATGCCCTCTGAAATT
GAAGCATCAAGAGCTATTGGGATTGTCCTTGTGGATCCAATCAACCTTGTGAATATGTTG
ATGGATGTTGACCAGTGGTCATGTGTGTTCTCCAACATTGTCTCAAAAGCAACAAATCTT
GGACTTCTAATGACAGGAGAAGATGGAAATCCTAATAAAGCCTTGCAAGTGATGACAGCA
CAATTTCATCTTCCTTCTCCACTAGTTAGGCCCCGGGAGGTCTATTTCGCGAGGTATTCT
CGACAACTAGATTTCAACACTTGGCTGGTAACTGATGTCTCCTTGGAGAGTATTTTTCCA
AATCCATTAGTCCAATGTCAAAGAAGACCATCAGGATGTCTAATTCAAGGGCTTCAAACT
GGACTATCATTGGTTACTTGGGTGGAGCATAATGTAGTATGCAATGGTTTGGTTCCCCAA
ATGTTCAGGCAGATACTTAAATCAGGTGTTGCATCCAGTGCAAAGCGCTGGATGCTGACC
ATGGAGAGACATTATGACAGAAATGCAACTGTGAAGAAACAGCATGATCAACCATTGGAA
CAACCCTTGCAAGACAATAACATAGAAGAAGGAAGGAAGAATTTAATGAAGTTGGCAGAA
CGGATGGTGAGAAGTTATAATGCTATTTTTAGCTCATGCAATGAAAACCAGTGGATGCCC
TTAAGGATACAAGGTGGTGGGAATAACTTCGCGAAAACAAGCTTGAATTTAGATGCTCGA
GGAACCCCTCGTGGTGTTGCAGTAACGATTTCAACGTCTGTGTGGCTACCGATCCCACAG
AAAGACGTTTTTGAGTTCCTTCGAGCAGGCGAAAATCGCTGCAAGTGGGATTTACTCTCC
ATTGGGTGTATGACTCGCGATGAACTACATATTTCTTCAGCACGAGACCCTGCAAACTCT
GTTTCACTAGTCATGGTAGAGCCTCCCAATGGAAGAGAAGACAAATCAGAAATGTTTTAC
CTCCAAGAAAGCTTCACAGATACAACAGTAATGTACATAATTTATGCACCAGTTGATGCC
TCAGCTGTGCAGCATATTATGGAAGGTAAATACTCAGATGATGTAGTAATGTTGGCTTCA
GGATTTGCTATCCTCCCTTTCTCTCCTGAAAAAACAAACTTTCCAGAGGATATTCTTACT
GGTGGAAGTGTTCTAACCATAGCATTTCAGTTGATGGATGAAGAACTATCAACGCCGGAG
TATCTTCCCCCACACTCGGTGTTAACAGCAAACAAACTCATATCTGAAACAGTTTCCCTA
ATCAAGGATTCATTGTTGTTCAACTCTGTATGTTGA

Peptide Sequence

PEP ID

XP_016502932.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2-like [Nicotiana tabacum]
Sequence

MSPEEKPGLEHYGYLESMSVLERDMPRASDLLLSVSMCAEVYKGKIVDLALAASEELRQM
AQEQEPLWLFDTNKQTEILNEAEYKRRFVHLDPTLEEIIKVITRGGPIDIPNLNGNVDDT
SENAQMSMLEMENSAMPSEIEASRAIGIVLVDPINLVNMLMDVDQWSCVFSNIVSKATNL
GLLMTGEDGNPNKALQVMTAQFHLPSPLVRPREVYFARYSRQLDFNTWLVTDVSLESIFP
NPLVQCQRRPSGCLIQGLQTGLSLVTWVEHNVVCNGLVPQMFRQILKSGVASSAKRWMLT
MERHYDRNATVKKQHDQPLEQPLQDNNIEEGRKNLMKLAERMVRSYNAIFSSCNENQWMP
LRIQGGGNNFAKTSLNLDARGTPRGVAVTISTSVWLPIPQKDVFEFLRAGENRCKWDLLS
IGCMTRDELHISSARDPANSVSLVMVEPPNGREDKSEMFYLQESFTDTTVMYIIYAPVDA
SAVQHIMEGKYSDDVVMLASGFAILPFSPEKTNFPEDILTGGSVLTIAFQLMDEELSTPE
YLPPHSVLTANKLISETVSLIKDSLLFNSVC

Transcript Sequence

Gene sequence data has not been registered.